Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902351.1_cds_XP_016452392.1_46638
CDS Infomation

[gene=LOC107776945] [db_xref=GeneID:107776945] [protein=protein IQ-DOMAIN 31-like] [protein_id=XP_016452392.1] [location=complement(join(3015..3046,3855..4875,5180..5260,5470..5670,6425..6706,7715..7789))] [gbkey=CDS]
Sequence

ATGGGAAAATCTCCTGGAAAATGGTTCAGGTCTTTGCTGGCAGGGAGAAAGTCTTCCAAA
TCTAGCACATCAAAAAAATCTTCGAATGAGAAAGCATTAGTAATTTCCACCAACGCGGCA
TTATCTGGTTTGTCTGTCCATCCGCCTTTGATATCTGAGCTAGTTGCTGGTAGTGCTGGT
GGAACAAAAGAGGACTCAAACCTTGATAAAGGAGGGGTCACTGATGAGGTGAGTCTCCCT
TCTATGAAGCAAGATGAAGATGAACAAAATACATGTCTTACCTTACCCGAGGATACTGAG
AAAATGAGGCTTGAGGAAGCTACTACGAAGACACAAGCTATTTTTAGGGGTTATCTGGCT
CGTCGAGCATTTTTTAGGCTCAAGGGCGTCATAAGGCTACAAGCTGCCATACGCGGCCAT
CTGGTCAGAAGGCAGGCTGTTGCCACATTATACTGTATACATGGCATTGTCAAGCTTCAA
GCACATGCACGTGGCCAGATTGTTAGGGGTTCCAGTATTGGCTGTGAAGTGATAACCAAA
CGAGGACTTGGACAACAGGATTCCAAACAATTCGAGTATCAACGAAATAATGCATCCAAA
CTAGCACAAGAGCTATCCAAGAATGAGTTCGCTACAAAGCTACTTGGTTCATCACCTACT
GTTATGCCTCTACACCTCCAATACAGTCCAGAGGAACCAAATTCTAGTCAGGAATGGTTA
GTCCGTTGGACTTTATCACATATTTGGCGACCACGGTCCAAACCAAAAACGCTTTCAAAT
ACAAAGCATAAAAAAGTTGAAGCAGACATGGCTGTGTCAAAGCACAATGGACGGAAAGTG
CTTTCTAGAAAGACGCAGAATGGTTCAAATCATTCCAGTTCGGGGTCAGAAAAGAAGAAA
TCAATTCCTTTAGTAAACTCTGTTCTTCAGAATCCAGGAAGTGAGATTAAGAAAGTAAAG
CATAATTTAAAGAAAGTGTCCAGCCCTATTTTGGAAAAACCTGTTCAGTCTGAGGCGGAC
ACTGAGAGGAAAAGGCAAAATCATGACACAACATCAAGTGCTCTCGTTCCTGAGGGGAGC
ATGACATCTGGCGAACCGTTGAAAAGTTTAGAAGGGACAACAGAAAATTCTACTAATGTG
GAGACACCTTCAGAAACACTAGTGATGGATGATACTATCACTCATTTGGATAGCCTTTCT
GTTTCTGATACGCATCACAAATCAATTTCTGACGCTGCTGATAGTTTTTCTCCATCTGAT
ATGCATCAAAAATTGATCACTGCTAACAGAGAGGATAGTCCTGTTGCAAATGACAATTCT
TGCACTAACCATGATAATGAAGGAAATGAGAGTAACATGACTAACAGAAGAGTTTCTTTA
CCTGCAAGCCATGATGTAGATGCAGGTACGCCAACGGCAAGAAAGGTGCCCAGCTATATG
GCTCCAACCAAGTCAGCTAAGGCTAAGTTGAAAGAGCAAGCCTCACCAAGGTTTGGGCAA
GATGTGTCCGAGAAGAATGCCCTAAGTAGACGTCATTCTTTGCCATCCCCAATGAATGGC
AAGCTGAGTTCATCGCCGCGGGTGCAGAGGCTGGTCCTAGCTAGTGCAAAAGAAGGAATC
AAGATTGATAGATCTTTATCATCTTCAAGGGATGGTACTGATAAGATGACTCGAGCAGAA
TGGAAGCGGTAA

Peptide Sequence

PEP ID

XP_016452392.1
PEP Infomation

PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tabacum]
Sequence

MGKSPGKWFRSLLAGRKSSKSSTSKKSSNEKALVISTNAALSGLSVHPPLISELVAGSAG
GTKEDSNLDKGGVTDEVSLPSMKQDEDEQNTCLTLPEDTEKMRLEEATTKTQAIFRGYLA
RRAFFRLKGVIRLQAAIRGHLVRRQAVATLYCIHGIVKLQAHARGQIVRGSSIGCEVITK
RGLGQQDSKQFEYQRNNASKLAQELSKNEFATKLLGSSPTVMPLHLQYSPEEPNSSQEWL
VRWTLSHIWRPRSKPKTLSNTKHKKVEADMAVSKHNGRKVLSRKTQNGSNHSSSGSEKKK
SIPLVNSVLQNPGSEIKKVKHNLKKVSSPILEKPVQSEADTERKRQNHDTTSSALVPEGS
MTSGEPLKSLEGTTENSTNVETPSETLVMDDTITHLDSLSVSDTHHKSISDAADSFSPSD
MHQKLITANREDSPVANDNSCTNHDNEGNESNMTNRRVSLPASHDVDAGTPTARKVPSYM
APTKSAKAKLKEQASPRFGQDVSEKNALSRRHSLPSPMNGKLSSSPRVQRLVLASAKEGI
KIDRSLSSSRDGTDKMTRAEWKR

Transcript Sequence

Gene sequence data has not been registered.